2MXC
Solution structure of the full length sorting nexin 3
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC/HMQC | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
2 | 3D HNCA | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
3 | 3D HN(CO)CA | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
4 | 3D HNCO | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
5 | 3D CBCA(CO)NH | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
6 | 3D HNCACB | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
7 | 3D HNCO | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
8 | 3D HN(CA)CO | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
9 | 3D HCCH-TOCSY | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
10 | 3D 1H-13C NOESY | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
11 | 3D 1H-15N NOESY | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 | |
12 | 2D 1H-13C HSQC | 0.5 mM [U-100% 13C; U-100% 15N] SNX3FL | 90% H2O/10% D2O | 0.100 | 6.5 | 1.000 atm | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UnityInova | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | CcpNmr Analysis |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift calculation | CcpNmr Analysis | 2.2 | CCPN |
2 | data analysis | CcpNmr Analysis | 2.2 | CCPN |
3 | structure solution | CcpNmr Analysis | 2.2 | CCPN |
4 | chemical shift calculation | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
5 | data analysis | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
6 | structure solution | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
7 | chemical shift calculation | CcpNmr Analysis | 2.2 | CCPN |
8 | data analysis | CcpNmr Analysis | 2.2 | CCPN |
9 | structure solution | CcpNmr Analysis | 2.2 | CCPN |
10 | chemical shift calculation | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
11 | data analysis | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
12 | structure solution | CcpNmr Analysis | 2.2 | Linge, O'Donoghue and Nilges |
13 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
14 | refinement | ARIA |