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Structure of the S-glycosylated bacteriocin ASM1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 2 2D 1H-13C HSQC 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 3 2D 1H-13C HMBC 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 4 2D 1H-1H TOCSY 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 5 2D 1H-15N-HSQC-TOCSY 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 6 2D 1H-13C-HSQC-TOCSY 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 7 2D 1H-13C-H2BC 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310 8 2D 1H-1H NOESY 1 mM protein 38% d3-acetonitrile, 56.8% water, 0.2% d-acetic acid, 5% D2O ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 2.1 Bruker Biospin 2 processing NMRPipe 2011.118.08.55 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 processing KUJIRA 0.9843 Naohiro Kobayashi 4 processing NMRView Johnson, One Moon Scientific 5 refinement CYANA 3.0 Guntert, Mumenthaler and Wuthrich 6 structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich