Experiment: 2MTS

Three-Dimensional Structure and Interaction Studies of Hepatitis C Virus p7 in 1,2-Dihexanoyl-sn-glycero-3-phosphocholine by Solution Nuclear Magnetic Resonance

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.5 mM [U-100% 13C; U-100% 15N] p7, 125 mM DHPC	90% H2O/10% D2O		4.0	ambient	323
2	3D 1H-15N HSQC NOESY	0.5 mM [U-100% 13C; U-100% 15N] p7, 125 mM DHPC	90% H2O/10% D2O		4.0	ambient	323
3	2D 1H-15N HSQC	0.5 mM [U-100% 15N] p7, 125 mM DHPC, 6 % polyacrylamide gel	90% H2O/10% D2O		4.0	ambient	323
4	3D HNCA	0.5 mM [U-100% 13C; U-100% 15N] p7, 125 mM DHPC	90% H2O/10% D2O		4.0	ambient	323

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	chemical shift assignment	Sparky		Goddard
3	structure solution	CS-ROSETTA		Shen, Vernon, Baker and Bax
4	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore