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Structure of decorin binding protein A from strain N40 of Borrelia burgdorferi
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 2 2D 1H-15N HSQC 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 3 3D 1H-13C NOESY aliphatic 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 4 3D HNCACB 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 5 3D CBCA(CO)NH 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 6 3D H(CCO)NH 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 7 3D C(CO)NH 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 8 3D 1H-13C NOESY 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298 9 3D 1H-15N NOESY 0.8 mM [U-100% 13C; U-100% 15N] DBPA, 50 mM sodium phosphate, 150 mM sodium chloride 95% H2O/5% D2O 0.2 5.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 data analysis NMRView Johnson, One Moon Scientific 3 structure solution CYANA Guntert, Mumenthaler and Wuthrich 4 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore