2MP3
Truncated L126Z-sod1 in DPC micelle
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D CBCA(CO)NH | 20 mM dodecylphosphocholine (DPC)-1, 400 uM [U-100% 13C; U-100% 15N] protein-2 | 90% H2O/10% D2O | 4 | ambient | 313 | ||
2 | 3D HNCACB | 20 mM dodecylphosphocholine (DPC)-1, 400 uM [U-100% 13C; U-100% 15N] protein-2 | 90% H2O/10% D2O | 4 | ambient | 313 | ||
3 | 3D 1H-15N NOESY | 20 mM dodecylphosphocholine (DPC)-1, 400 uM [U-100% 13C; U-100% 15N] protein-2 | 90% H2O/10% D2O | 4 | ambient | 313 | ||
4 | 3D 1H-15N TOCSY | 20 mM dodecylphosphocholine (DPC)-1, 400 uM [U-100% 13C; U-100% 15N] protein-2 | 90% H2O/10% D2O | 4 | ambient | 313 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | Amber force-field for energy minimization | Cyana_2.1 |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 5 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | Cyana_2.1 | 2.1 | Guntert, Mumenthaler and Wuthrich |
2 | refinement | GROMACS |