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Solution structure of the complex formed by the region 2 of E. coli sigmaE and its cognate -10 promoter element non template strand TGTCAAA.
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 2 2D 1H-13C HSQC 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 3 2D 1H-13C HSQC aromatic 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 4 3D HNCACB 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 5 3D CBCA(CO)NH 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 6 3D HNCO 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 7 3D HNCA 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 8 3D HN(CO)CA 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 9 3D HCCH-TOCSY 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 10 3D 1H-15N NOESY 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 11 3D 1H-13C NOESY aliphatic 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 12 3D 1H-13C NOESY aromatic 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 90% H2O/10% D2O 0.07 6.5 ambient 303 13 2D NOESY 1H-1H F1F2F 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 100% D2O 0.07 6.5 ambient 303 14 2D NOESY 1H-1H F2F 0.8 mM [U-100% 13C; U-100% 15N] protein_1, 0.8 mM protein_2 100% D2O 0.07 6.5 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 700 3 Bruker AVANCE 900
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 30 Conformers Submitted Total Number 18 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 3.0 Bruker Biospin 2 structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich 3 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo and Kollman 4 chemical shift assignment CARA Keller and Wuthrich 5 data analysis CARA Keller and Wuthrich