2M8J
Structure of Pin1 WW domain phospho-mimic S16E
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D H(CCO)NH | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
2 | 3D C(CO)NH | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
3 | 3D HNCACB | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
4 | 3D HCACO | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
5 | 3D HBHA(CO)NH | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
6 | 2D 1H-15N HSQC | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
7 | 2D 1H-13C HSQC | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
8 | 2D 1H-13C HSQC aromatic | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
9 | 3D 1H-15N NOESY | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 | |
10 | 3D 1H-13C NOESY | 25 mM HEPES, 50 mM sodium chloride, 1 mM DTT | 90% H2O/10% D2O | 0.05 | 7.5 | ambient | 291 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | chemical shift assignment | Sparky | Goddard | |
3 | peak picking | Sparky | Goddard | |
4 | data analysis | Sparky | Goddard | |
5 | processing | TopSpin | Bruker Biospin | |
6 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax | |
7 | refinement | OPAL | Luginbuhl, Guntert, Billeter and Wuthrich | |
8 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |