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High-resolution NMR structure and cryo-EM imaging support multiple functional roles for the accessory I-domain of phage P22 coat protein
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D 1H-15N HSQC
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
2
3D HNCACB
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
3
3D HNCA
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
4
3D HN(CO)CA
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
5
3D HNCO
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
6
3D HN(CA)CO
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
7
3D CCH-TOCSY
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
1% H2O/99% D2O
20
6.0
ambient
310.15
8
3D HCCH-TOCSY
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
1% H2O/99% D2O
20
6.0
ambient
310.15
9
3D HNHB
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
10
3D Long-range HNCO
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
11
3D HNHA
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
12
3D 1H-15N TOCSY
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
13
3D 1H-13C NOESY
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
1% H2O/99% D2O
20
6.0
ambient
310.15
14
3D 1H-15N NOESY
1.5 mM [U-100% 13C; U-100% 15N] protein, 20 mM sodium phosphate
90% H2O/10% D2O
20
6.0
ambient
310.15
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
600
2
Varian
INOVA
800
NMR Refinement
Method
Details
Software
simulated annealing, torsion angle dynamics
Automated assignment of NOE spectra was carried out using ARIA using floating chirality. CCPNmr Analysis was used to inspect violations and refine the structure for further calculations with ARIA.