2LZE
Ligase 10C
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 1 mM [U-99% 13C; U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
2 | 3D CBCA(CO)NH | 1 mM [U-99% 13C; U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
3 | 3D 1H-15N TOCSY | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
4 | 3D 1H-15N NOESY | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
5 | 3D HNHA | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
6 | 3D H(CCO)NH | 1 mM [U-99% 13C; U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
7 | 3D C(CO)NH | 1 mM [U-99% 13C; U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
8 | 2D 1H-15N HSQC | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
9 | 2D 1H-15N CPMG | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
10 | 2D 1H-15N T1 | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
11 | 2D 1H-15N T2 | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 | |
12 | 2D 1H-15N ssNOE | 1 mM [U-99% 15N] protein | 90% H2O/10% D2O | 0.16 | 7.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 700 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | THE STRUCTURED REGION OF LIGASE 10C IS BETWEEN RESIDUES 17 AND 69, CAPPED AT EACH END WITH TAGS TO ASSIST IN PURIFICATION. | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
2 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
3 | chemical shift assignment | PINE | Bahrami, Markley, Assadi, and Eghbalnia |