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NMR structure of the protein ZP_02034617.1 from Bacteroides capillosus ATCC 29799
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 2 4D APSY-HACANH 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 3 5D APSY-HACACONH 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 4 5D APSY-CBCACONH 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 5 3D 1H-15N NOESY 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 6 3D 1H-13C NOESY aliphatic 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298 7 2D 1H-13C HSQC aromatic 1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide 95% H2O/5% D2O 0.0798 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin 2.1 Bruker Biospin 2 processing TopSpin 2.1 Bruker Biospin 3 processing XEASY Bartels et al. 4 chemical shift assignment CARA Keller and Wuthrich 5 data analysis CARA Keller and Wuthrich 6 peak picking UNIO Herrmann and Wuthrich 7 chemical shift assignment UNIO Herrmann and Wuthrich 8 structure solution UNIO Herrmann and Wuthrich 9 refinement OPAL Luginbuhl, Guntert, Billeter and Wuthrich 10 structure solution CYANA Guntert, Mumenthaler and Wuthrich