☰ Navigation Tabs
human CEB25 minisatellite G-quadruplex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 2 2D 1H-1H TOCSY 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 3 2D 1H-13C HSQC 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 4 2D 1H-1H COSY 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 5 2D 1H-13C HSQC 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 6 2D 1H-31P-HSQC 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298 7 2D 1H-13C-HMBC 0.2-2 mM DNA (26-MER) 90% H2O/10% D2O 90 7.00 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AMX 400 2 Bruker AMX 600 3 Bruker AMX 700 4 Bruker AMX 800
NMR Refinement Method Details Software simulated annealing, molecular dynamics DGSA-distance geometry simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR NIH 2.30 Schwieters, Kuszewski, Tjandra and Clore 2 data analysis X-PLOR NIH 2.30 Schwieters, Kuszewski, Tjandra and Clore 3 structure solution Sparky Goddard 4 data analysis Sparky Goddard 5 structure solution Felix Accelrys Software Inc. 6 data analysis Felix Accelrys Software Inc. 7 refinement Felix Schwieters, Kuszewski, Tjandra and Clore