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Solution structure and binding studies of the RanBP2-type zinc finger of RBM5
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 100 uM RBM5-ZF1, 150 uM ZINC ION 90% H2O/10% D2O 0 5.7 ambient 293 2 2D DQF-COSY 100 uM RBM5-ZF1, 150 uM ZINC ION 90% H2O/10% D2O 0 5.7 ambient 293 3 2D 1H-1H NOESY 100 uM RBM5-ZF1, 150 uM ZINC ION 90% H2O/10% D2O 0 5.7 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing, Energy minimization TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin v2.1 Bruker Biospin 2 data analysis TopSpin v2.1 Bruker Biospin 3 chemical shift assignment CARA v1.5,v1.8 Keller and Wuthrich 4 peak picking CARA v1.5,v1.8 Keller and Wuthrich 5 structure solution CYANA v2.1 Guntert, Mumenthaler and Wuthrich 6 refinement CYANA v2.1 Guntert, Mumenthaler and Wuthrich 7 energy minimization SYBYL Tripos 8 refinement SYBYL Tripos