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Mono-O-GalNAc glycosylated Mucin sequence based on MUC2 Mucin glycoprotein tandem repeat
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 100% D2O 4.5 ambient 288 2 3D TOCSY-NOESY 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 90% H2O/10% D2O 4.5 ambient 288 3 2D 1H-15N HSQC 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 90% H2O/10% D2O 4.5 ambient 288 4 2D 1H-13C HSQC 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 90% H2O/10% D2O 4.5 ambient 288 5 2D 1H-1H TOCSY 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 90% H2O/10% D2O 4.5 ambient 288 6 2D 1H-1H COSY 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 100% D2O 4.5 ambient 288 7 2D 1H-13C HMBC 2-10 mM MUC2 Mucin Domain Peptide, 2-10 mM SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) 90% H2O/10% D2O 4.5 ambient 288
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800 3 Varian INOVA 900
NMR Refinement Method Details Software torsion space simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 62 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CNS Brunger A. T. et.al. 2 refinement XPLOR-NIH Schwieters, Kuszewski, Tjandra and Clore