☰ Navigation Tabs
NMR structure of the calcium-bound form of the protein YP_001302112.1 from Parabacteroides distasonis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 2 3D 1H-15N NOESY 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 3 3D 1H-13C NOESY aliphatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 4 3D 1H-13C NOESY aromatic 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 5 5D APSY CBCACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 6 4D APSY HACANH 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298 7 5D APSY HACACONH 1.2 mM [U-98% 13C; U-98% 15N] protein, 10 mM calcium chloride, 25 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide 95% H2O/5% D2O 0.145 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA Guntert P. 2 refinement OPALp Luginbuhl, Guntert, Billeter and Wuthrich 3 collection TopSpin Bruker Biospin 4 processing TopSpin Bruker Biospin 5 data analysis TopSpin Bruker Biospin 6 chemical shift assignment CARA Keller and Wuthrich 7 data analysis CARA Keller and Wuthrich