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Solution Structure of the Pitx2 Homeodomain R24H mutant
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 2 2D 1H-13C HSQC 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 3 3D CBCA(CO)NH 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 4 3D C(CO)NH 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 5 3D HNCA 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 6 3D HNCACB 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 7 3D 1H-15N NOESY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 8 3D 1H-13C NOESY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 9 3D HCCH-TOCSY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295 10 3D H(CCO)NH 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 R24H 90% H2O/10% D2O 0.15 7 ambient 295
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600 3 Varian INOVA 500 4 Varian INOVA 400
NMR Refinement Method Details Software molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (minimized average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 11 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 chemical shift assignment NMRView Johnson, One Moon Scientific