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Solution Structure of the Pitx2 Homeodomain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 2 2D 1H-13C HSQC aromatic 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 3 2D 1H-13C HSQC aliphatic 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 4 3D 1H-15N NOESY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 5 3D 1H-13C NOESY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 6 3D HNCACB 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 7 3D HNCA 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 8 3D H(CCO)NH 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 9 3D HCCH-TOCSY 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295 10 3D HN(COCA)CB 10 mM sodium phosphate, 150 mM sodium sulphate, 1 mM EDTA, 2 mM [U-98% 13C; U-98% 15N] Pitx2 Homeodomain 90% H2O/10% D2O 150 7.0 ambient 295
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600 3 Varian INOVA 500 4 Varian INOVA 400
NMR Refinement Method Details Software torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria Lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (minimized average)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Zhengrong and Bax 2 refinement Amber 11 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm