2L79
Solution NMR structure of PAP248-286 in 30% TFE
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1.2 mM PAP248-286-1; 20 mM sodium phosphate-2; 10 % [U-99% 2H] D2O-3; 30 % [U-99% 2H] TFE-4; trifluoroethanol/water | trifluoroethanol/water | 7.5 | ambient | 298 | ||
2 | 2D 1H-1H NOESY | 1.2 mM PAP248-286-1; 20 mM sodium phosphate-2; 10 % [U-99% 2H] D2O-3; 30 % [U-99% 2H] TFE-4; trifluoroethanol/water | trifluoroethanol/water | 7.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, simulated annealing | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | refinement | TALOS | Cornilescu, Delaglio and Bax | |
4 | structure solution | MOLMOL | Koradi, Billeter and Wuthrich | |
5 | chemical shift assignment | Sparky | Goddard | |
6 | data analysis | Sparky | Goddard | |
7 | data analysis | ProcheckNMR | Laskowski and MacArthur | |
8 | structure solution | ProcheckNMR | Laskowski and MacArthur | |
9 | collection | TopSpin | Bruker Biospin | |
10 | processing | TopSpin | Bruker Biospin |