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Solution NMR structure of protein lipocalin 12 from rat epididymis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 2 2D 1H-13C HSQC 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 3 3D CBCA(CO)NH 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 4 3D HNCACB 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 5 3D HNCO 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 6 4D 1H-15N NOESY 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 7 4D 1H-13C NOESY 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 8 3D MQ-CCH-TOCSY 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 9 3D HN(CO)CA 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310 10 3D HNCA 0.5mM [U-100% 13C; U-100% 15N] rLcn12-1, 90% H2O, 10% D2O 90% H2O/10% D2O 20mM NaAC 4.5 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker Advance III 800
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 320 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.2 Brunger A. T. et.al. 2 chemical shift assignment ARIA 2.2 Linge, O'Donoghue and Nilges