☰ Navigation Tabs
Redox linked conformational changes in cytochrome C3 from Desulfovibrio desulfuricans ATCC 27774
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY 1.85-2 mM cytochrome c3-1 90% H2O/10% D2O 0.1 6.46 ambient 298 2 2D 1H-1H NOESY 1.85-2 mM cytochrome c3-1 90% H2O/10% D2O 0.1 6.46 ambient 298 3 2D 1H-1H TOCSY 1.85-2 mM cytochrome c3-1 90% H2O/10% D2O 0.1 6.46 ambient 298 4 2D 1H-1H NOESY 1.85-2 mM cytochrome c3-1 90% H2O/10% D2O 0.1 6.46 ambient 298 5 2D 1H-1H TOCSY 1.85-2 mM cytochrome c3-1 90% H2O/10% D2O 0.1 6.46 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR Bruker Biospin 2 data analysis XwinNMR Bruker Biospin 3 processing TopSpin Bruker Biospin 4 data analysis TopSpin Bruker Biospin 5 chemical shift assignment XEASY Bartels et al. 6 peak picking XEASY Bartels et al. 7 structure solution PARADYANA (INDYANA) Turner et al. 8 refinement PARADYANA (INDYANA) Turner et al. 9 chemical shift assignment Sparky Goddard 10 peak picking Sparky Goddard 11 superimposition MOLMOL Koradi, Billeter and Wuthrich 12 visual inspection MOLMOL Koradi, Billeter and Wuthrich 13 rms and mean structure calculations MOLMOL Koradi, Billeter and Wuthrich