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Central B domain of Rv0899 from Mycobacterium tuberculosis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 2 IPAP 0.4 mM [U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 5 2D 1H-13C HSQC 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 6 3D HNCA 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 7 3D HNCACB 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 8 3D C(CO)NH 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 9 3D HCCH-TOCSY 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220), 0.3 mM [U-99% 15N] Rv0899(73-220) 100% D2O 0.005 7.0 ambient 313 10 3D 1H-15N NOESY 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 11 3D 1H-15N TOCSY 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 12 3D 1H-13C NOESY 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313 13 3D HNCO 1.7 mM [U-99% 15N] Rv0899(73-220), 1 mM [U-99% 13C; U-99% 15N] Rv0899(73-220) 95% H2O/5% D2O 0.005 7.0 ambient 313
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics XPLOR-NIH, XPLOR-NIH internal variable dynamics module (IVM) NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 3.0 Delaglio, F. et al. 2 data analysis Sparky 3.115 Goddard, T.D. et al. 3 chemical shift calculation TALOS Cornilescu, G. et al. 4 refinement X-PLOR NIH 2.24 Schwieters, C.D. et al. 5 rdc analysis REDCAT Valafar, H. et al. 6 structure analysis PyMOL DeLano, W.L. et al.