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Human NEDD4 3rd WW Domain Complex with Ebola Zaire Virus Matrix Protein VP40 Derived Peptide ILPTAPPEYMEA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1mM [U-100% 15N] PROTEIN; 10mM PEPTIDE; 20mM sodium phosphate; 0.02 v/v % sodium azide; 90% H2O/10% D2O 90% H2O/10% D2O 7.00 ambient 288 2 2D 1H-1H TOCSY 1mM [U-100% 15N] PROTEIN; 10mM PEPTIDE; 20mM sodium phosphate; 0.02 v/v % sodium azide; 90% H2O/10% D2O 90% H2O/10% D2O 7.00 ambient 288 3 2D 1H-1H NOESY 1mM [U-100% 15N] PROTEIN; 10mM PEPTIDE; 20mM sodium phosphate; 0.02 v/v % sodium azide; 90% H2O/10% D2O 90% H2O/10% D2O 7.00 ambient 288
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700 2 Bruker AVANCE 600
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing XEASY
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 120 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment XEASY Bartels et al. 2 data analysis XEASY Bartels et al. 3 peak picking XEASY Bartels et al. 4 structure solution CNSSOLVE Brunger, Adams, Clore, Gros, Nilges and Read 5 refinement CNSSOLVE Brunger, Adams, Clore, Gros, Nilges and Read 6 processing TopSpin Bruker Biospin