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Structure of ANA-RNA hybrid duplex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY 0.8 mM ANA/RNA hybrid duplex-1 90% H2O/10% D2O 7 ambient 298 2 2D 1H-1H NOESY 0.8 mM ANA/RNA hybrid duplex-1 90% H2O/10% D2O 7 ambient 298 3 2D 1H-1H TOCSY 0.8 mM ANA/RNA hybrid duplex-1 90% H2O/10% D2O 7 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker Advance 600
NMR Refinement Method Details Software molecular dynamics, matrix relaxation Amber
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 10 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 2 data analysis Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 3 structure solution Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 4 refinement Amber Goddard 5 data analysis Amber Goddard 6 structure solution Amber Goddard 7 refinement Amber Koradi, Billeter and Wuthrich 8 data analysis Amber Koradi, Billeter and Wuthrich 9 structure solution Amber Koradi, Billeter and Wuthrich