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NMR Solution structures of fully oxidised cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY 1.8-2.0 mM cytochrome c3-1 90% H2O/10% D2O 0,1 4.2 ambient 298 2 2D 1H-1H TOCSY 1.8-2.0 mM cytochrome c3-1 90% H2O/10% D2O 0,1 4.2 ambient 298 3 2D 1H-1H NOESY 1.8-2.0 mM cytochrome c3-1 90% H2O/10% D2O 0,1 4.2 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 600 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis XwinNMR Bruker Biospin 2 peak picking XEASY Bartels et al. 3 chemical shift assignment XEASY Bartels et al. 4 structure solution PARADYANA (INDYANA) Turner et al. 5 refinement PARADYANA (INDYANA) Turner et al. 6 superimposition MOLMOL Koradi, Billeter and Wuthrich 7 visual inspection MOLMOL Koradi, Billeter and Wuthrich 8 rms and mean structure calculations MOLMOL Koradi, Billeter and Wuthrich 9 identification and classification of the consensus secondary structure ProcheckNMR Laskowski and MacArthur