☰ Navigation Tabs
Solution structure of human Interleukin 1a
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 2 2D 1H-13C HSQC 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 3 3D HNCA 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 4 3D HNCO 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 5 3D HN(CO)CA 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 6 3D CBCA(CO)NH 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 7 3D HBHA(CO)NH 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 8 3D H(CCO)NH 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 9 3D HCCH-TOCSY 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 10 3D C(CO)NH 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 11 3D 1H-15N NOESY 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298 12 3D 1H-13C NOESY 10mM TRIS, 100mM sodium chloride, 1.4mM protein 90% H2O/10% D2O 0.1 7.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian VNMRS 700
NMR Refinement Method Details Software simulated annealing ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 14 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 automated noe assignment ARIA 1.1 Dr. Michael Nilges, Institut Pasteur 2 nmr structure calculation ARIA 1.1 Dr. Michael Nilges, Institut Pasteur 3 chemical shift assignment Sparky Goddard 4 dihedral angles TALOS Cornilescu, Delaglio and Bax 5 processing VnmrJ VNMRJ_2.2C Varian 6 refinement CNS