2KJB

Solution structure of CzrA in the DNA bound state


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.8 mM 28 bp Duplex DNA, 10 mM [U-99% 2H] MES, 0.1 mM sodium chloride, 0.04 % DSS, 1.5 mM U-[2H,13C,15N] Iled1-[CH3] Leu, Val-[CH3/CH3] CzrA-1193% H2O/7% D2O0.16.0ambient313
23D 13C/13C edited methyl NOESY1.8 mM 28 bp Duplex DNA, 10 mM [U-99% 2H] MES, 0.1 mM sodium chloride, 0.04 % DSS, 1.5 mM U-[2H,13C,15N] Iled1-[CH3] Leu, Val-[CH3/CH3] CzrA-1193% H2O/7% D2O0.16.0ambient313
31H-15N TROSY-NOESY1.8 mM 28 bp Duplex DNA, 10 mM [U-99% 2H] MES, 0.1 mM sodium chloride, 0.04 % DSS, 1.5 mM U-[2H,13C,15N] Iled1-[CH3] Leu, Val-[CH3/CH3] CzrA-1193% H2O/7% D2O0.16.0ambient313
42D IPAP-HSQC1.8 mM 28 bp Duplex DNA, 10 mM [U-99% 2H] MES, 0.1 mM sodium chloride, 0.04 % DSS, 15 mg/mL Pf1 phage, 1 mM [U-100% 2H,13C,15N] CzrA93% H2O/7% D2O0.16.0ambient313
53D HNCO1.8 mM 28 bp Duplex DNA, 10 mM [U-99% 2H] MES, 0.1 mM sodium chloride, 0.04 % DSS, 15 mg/mL Pf1 phage, 1 mM [U-100% 2H,13C,15N] CzrA93% H2O/7% D2O0.16.0ambient313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA900
2VarianINOVA800
3VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number21
Representative Model1 (minimized average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR-NIHSchwieters, Kuszewski, Tjandra and Clore