2KC0

Solution structure of the factor H binding protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5mM [U-98% 13C; U-98% 15N] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
22D 1H-13C HSQC0.5mM [U-98% 13C; U-98% 15N] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
32D 1H-1H NOESY0.8mM lipoprotein, 50mM potassium phosphate-690% H2O/10% D2O50mM phosphate buffer7ambient298
43D HNCACB0.4mM [U-100% 13C; U-100% 15N; U-80% 2H] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
53D CBCA(CO)NH0.4mM [U-100% 13C; U-100% 15N; U-80% 2H] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
63D HNCA0.4mM [U-100% 13C; U-100% 15N; U-80% 2H] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
73D HNCO0.4mM [U-100% 13C; U-100% 15N; U-80% 2H] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
83D HCCH-TOCSY0.5mM [U-98% 13C; U-98% 15N] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
93D 1H-15N NOESY0.5mM [U-98% 13C; U-98% 15N] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
103D 1H-13C NOESY0.5mM [U-98% 13C; U-98% 15N] lipoprotein, 50mM potassium phosphate90% H2O/10% D2O50mM phosphate buffer7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2BrukerAVANCE700
3BrukerAVANCE900
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingThe structures were based on a total of 2987 meaningful distance constraints, 316 dihedral angle restraints and 73 RDCs, 900 random conformers were annealed in 13000 stepsTopSpin
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number900
Conformers Submitted Total Number25
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin1.3Bruker Biospin
2structure solutionCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARAKeller and Wuthrich
4data analysisXEASYBartels et al.
5validationProcheckNMR10Laskowski and MacArthur
6refinementCYANAGuntert, Mumenthaler and Wuthrich