2K3F
Ribosomal protein L11 from Thermotoga maritima
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 1.2 mM [U-100% 15N] L11, 20 mM potassium phosphate, 50 mM potassium chloride, 10 % [U-100% 2H] D2O | 90% H2O/10% D2O | 70 | 6.1 | ambient | 298 | |
2 | 3D 1H-13C NOESY | 1.2 mM [U-100% 15N] L11, 20 mM potassium phosphate, 50 mM potassium chloride, 10 % [U-100% 2H] D2O | 90% H2O/10% D2O | 70 | 6.1 | ambient | 298 | |
3 | IPAP(1H,15N)HSQC | 1.2 mM [U-100% 15N] L11, 20 mM potassium phosphate, 50 mM potassium chloride, 10 % [U-100% 2H] D2O | 90% H2O/10% D2O | 70 | 6.1 | ambient | 298 | |
4 | IPAP(1H,15N)HSQC | 1.2 mM [U-100% 15N] L11, 20 mM potassium phosphate, 50 mM potassium chloride, 10 % [U-100% 2H] D2O | 90% H2O/10% D2O | 70 | 6.1 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Bruker | DRX | 700 |
3 | Varian | INOVA | 600 |
4 | Varian | INOVA | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | Initial coordinates are calculated by CNS and further refinement in water has been performed using ARIA protocols with additional diffusion anisotropy data | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.0 | Bruker Biospin |
2 | processing | XwinNMR | 3.0 | Bruker Biospin |
3 | collection | VNMR | Varian | |
4 | processing | VNMR | Varian | |
5 | data analysis | XEASY | Bartels et al. | |
6 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
7 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
8 | refinement | ARIA1.2 | Nilges | |
9 | structure solution | ARIA1.2 | Nilges |