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Solution structure of MLL CXXC domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 2 3D 1H-13C NOESY 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 3 IPAP 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 4 HNCO NCo 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 5 HNCO CoCa 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 6 IPAP 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 7 HNCO NCo 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298 8 HNCO CoCa 1 mM [U-98% 13C; U-98% 15N] CXXC 95% H2O/5% D2O 0.3 7.1 ambient atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 500
NMR Refinement Method Details Software simulated annealing, distance geometry high temp annealing without rRDCs, low temp annealing with RDCs Sparky
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 14 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky 3.110 Goddard 2 data analysis Sparky 3.110 Goddard 3 peak picking Sparky 3.110 Goddard 4 processing NMRPipe 2.5 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 5 structure solution CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read 6 refinement CNS 1.2 Brunger, Adams, Clore, Gros, Nilges and Read