2JWQ
G-quadruplex recognition by quinacridines: a SAR, NMR and Biological study
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1,3 mM G-quadruplex | 90% H2O/10% D2O | 0.1 M KCl and 0.01 M K2HPO4 | 7 | 1 atm | 318 | |
2 | 2D DQF-COSY | 1,3 mM G-quadruplex | 90% H2O/10% D2O | 0.1 M KCl and 0.01 M K2HPO4 | 7 | 1 atm | 318 | |
3 | 2D 1H-1H NOESY | 1,3 mM G-quadruplex | 90% H2O/10% D2O | 0.1 M KCl and 0.01 M K2HPO4 | 7 | 1 atm | 318 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Discover |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 4 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | Discover | 2004.1 | Accelrys Software Inc. |