2JU6
Solid-State Protein Structure Determination with Proton-Detected Triple Resonance 3D Magic-Angle Spinning NMR Spectroscopy
SOLID-STATE NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NH | 5 mM [U-13C; U-15N; U-2H] GB1, 50 % isopropyl alcohol, 25 % (4R)-2-Methylpentane-2,4-diol, 50 mM sodium phosphate | Solid Slurry | 5.5 | ambient | 281 | ||
2 | 3D CON(H)H | 5 mM [U-13C; U-15N; U-2H] GB1, 50 % isopropyl alcohol, 25 % (4R)-2-Methylpentane-2,4-diol, 50 mM sodium phosphate | Solid Slurry | 5.5 | ambient | 281 | ||
3 | 3D HN(H)H | 5 mM [U-13C; U-15N; U-2H] GB1, 50 % isopropyl alcohol, 25 % (4R)-2-Methylpentane-2,4-diol, 50 mM sodium phosphate | Solid Slurry | 5.5 | ambient | 281 | ||
4 | 2D N(H)H | 5 mM [U-13C; U-15N; U-2H] GB1, 50 % isopropyl alcohol, 25 % (4R)-2-Methylpentane-2,4-diol, 50 mM sodium phosphate | Solid Slurry | 5.5 | ambient | 281 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 750 |
NMR Refinement | ||
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Method | Details | Software |
DGSA-distance geometry simulated annealing, molecular dynamics | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 252 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR NIH | 2.16.0 | Schwieters, C.D. et al. |
2 | refinement | X-PLOR NIH | 2.16.0 | Schwieters, C.D. et al. |
3 | processing | NMRPipe | Delaglio, F. et al. | |
4 | chemical shift assignment | Sparky | Goddard, T.D. et al. | |
5 | collection | SpinSight | Varian |