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Differences in the electrostatic surfaces of the type III secretion needle proteins
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 2 3D HNCA 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 3 3D HNCO 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 4 3D CBCA(CO)NH 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 5 3D HNCACB 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 6 3D HBHA(CO)NH 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 7 3D 1H-15N NOESY 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298 8 3D 1H-13C NOESY 0.8 mM entity 90% H2O/10% D2O 70 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing, molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 7 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 data analysis NMRView Johnson, One Moon Scientific 5 refinement CYANA Guntert, Mumenthaler and Wuthrich