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Solution structure of fly troponin C, isoform F1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.7 mM [U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 2 2D 1H-13C HSQC 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 3 3D 1H-15N NOESY 0.7 mM [U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 4 3D 1H-13C NOESY 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 5 3D HN(COCA)CB 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 6 3D HNCA 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 7 3D HNCACB 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 8 3D CBCA(CO)NH 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 9 3D HNCO 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 10 3D 1H-15N TOCSY 0.7 mM [U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298 11 3D HCCH-TOCSY 0.7 mM [U-99% 13C; U-99% 15N] muscle protein, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 6.8 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITY 500 2 Varian INOVA 600 3 Varian INOVA 800 4 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics water refinement VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 20 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR Varian 2 collection XwinNMR Bruker Biospin 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 structure solution ARIA 1.2 Linge, O'Donoghue and Nilges 5 data analysis XEASY Bartels et al. 6 refinement ARIA 1.2 Linge, O'Donoghue and Nilges