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L-ficolin complexed to N-acetyl-cystein (150mM)
Crystallization Crystal Properties Matthews coefficient Solvent content 2.53 50.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.4 α = 90 b = 96.4 β = 90 c = 140.29 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2006-02-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 19.97 90.9 0.13 6.3 2.4 33431
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.8 19.97 32326 1702 100 0.201 0.197 0.1907 0.27 0.2601 RANDOM 29.32
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.2 0.1 0.2 -0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.742 r_dihedral_angle_3_deg 16.624 r_dihedral_angle_4_deg 16.154 r_dihedral_angle_1_deg 5.881 r_scangle_it 1.454 r_mcangle_it 1.339 r_angle_refined_deg 1.098 r_scbond_it 1.026 r_mcbond_it 0.819 r_symmetry_vdw_refined 0.531
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.742 r_dihedral_angle_3_deg 16.624 r_dihedral_angle_4_deg 16.154 r_dihedral_angle_1_deg 5.881 r_scangle_it 1.454 r_mcangle_it 1.339 r_angle_refined_deg 1.098 r_scbond_it 1.026 r_mcbond_it 0.819 r_symmetry_vdw_refined 0.531 r_nbtor_refined 0.332 r_nbd_refined 0.254 r_symmetry_hbond_refined 0.232 r_xyhbond_nbd_refined 0.214 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10326 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms 203
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling