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Clostridium botulinum Serotype A Light Chain inhibited by 4-chlorocinnamic hydroxamate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 10-15% PEG 2000 MMe, 0.3M (NH4)2HPO4, 0.05M TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.31 46.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.656 α = 90 b = 67.694 β = 106.53 c = 98.396 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2006-02-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X12B 1.0000 NSLS X12B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 97.9 0.094 12.7 3.5 73310 71771
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 95.3 0.455 3.2 3.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.9 50 71771 68126 3626 97.86 0.17496 0.17281 0.215 0.21556 0.2473 RANDOM 26.707
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.88 -0.25 0.03 0.71
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.329 r_dihedral_angle_4_deg 15.265 r_dihedral_angle_3_deg 12.029 r_dihedral_angle_1_deg 6.381 r_scangle_it 2.576 r_scbond_it 1.766 r_angle_refined_deg 1.236 r_mcangle_it 1.212 r_angle_other_deg 0.864 r_mcbond_it 0.792
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.329 r_dihedral_angle_4_deg 15.265 r_dihedral_angle_3_deg 12.029 r_dihedral_angle_1_deg 6.381 r_scangle_it 2.576 r_scbond_it 1.766 r_angle_refined_deg 1.236 r_mcangle_it 1.212 r_angle_other_deg 0.864 r_mcbond_it 0.792 r_nbd_refined 0.198 r_symmetry_hbond_refined 0.195 r_symmetry_vdw_other 0.192 r_nbd_other 0.184 r_nbtor_refined 0.18 r_symmetry_vdw_refined 0.172 r_mcbond_other 0.165 r_xyhbond_nbd_refined 0.159 r_nbtor_other 0.083 r_chiral_restr 0.076 r_metal_ion_refined 0.055 r_xyhbond_nbd_other 0.028 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6646 Nucleic Acid Atoms Solvent Atoms 615 Heterogen Atoms 33
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction CBASS data collection