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Crystal Structure of the Protein of Unknown Function from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 295 25% PEG5K MME, 0.2M ammonium sulfate, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.77 55.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.424 α = 90 b = 100.458 β = 100.33 c = 140.845 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2004-10-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.17 28.52 96.7 0.104 7 7.7 107066 107066
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.17 2.25 84 0.597 2.1 5 9259
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.17 28.52 96251 96251 10728 96.62 0.19359 0.19359 0.18728 0.25017 0.247 RANDOM 21.468
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.5 -1.04 1.36 -2.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.744 r_dihedral_angle_4_deg 22.459 r_dihedral_angle_3_deg 18.455 r_dihedral_angle_1_deg 5.546 r_scangle_it 2.47 r_scbond_it 1.656 r_angle_refined_deg 1.429 r_mcangle_it 0.937 r_mcbond_it 0.578 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.744 r_dihedral_angle_4_deg 22.459 r_dihedral_angle_3_deg 18.455 r_dihedral_angle_1_deg 5.546 r_scangle_it 2.47 r_scbond_it 1.656 r_angle_refined_deg 1.429 r_mcangle_it 0.937 r_mcbond_it 0.578 r_nbtor_refined 0.306 r_nbd_refined 0.22 r_symmetry_vdw_refined 0.219 r_symmetry_hbond_refined 0.217 r_xyhbond_nbd_refined 0.173 r_chiral_restr 0.104 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13123 Nucleic Acid Atoms Solvent Atoms 1059 Heterogen Atoms 103
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling HKL-3000 phasing SHELXCD phasing SHELXD phasing SHELXE model building MLPHARE phasing SOLVE phasing RESOLVE phasing PHENIX phasing