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Solution structure of Arabidopsis thaliana protein At1g70830, a member of the major latex protein family
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
3D_15N-separated_NOESY
0.7 mM At1g70830 U-15N/13C protein, 10 mM deuterated bis-tris, 5 mM Dithiothreitol, 95% H2O, 5% D2O
95% H2O/5% D2O
0.002 mM
7.0
1 atm
298
2
3D_13C-separated_NOESY
0.7 mM At1g70830 U-15N/13C protein, 10 mM deuterated bis-tris, 5 mM Dithiothreitol, 95% H2O, 5% D2O
95% H2O/5% D2O
0.002 mM
7.0
1 atm
298
3
3D_13C-separated_NOESY (AROMATIC)
0.7 mM At1g70830 U-15N/13C protein, 10 mM deuterated bis-tris, 5 mM Dithiothreitol, 95% H2O, 5% D2O
95% H2O/5% D2O
0.002 mM
7.0
1 atm
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
DRX
600
NMR Refinement
Method
Details
Software
AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT.
FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT SOLVENT
STRUCTURES ARE BASED ON A TOTAL OF 1766 NOE CONSTRAINTS ( 597 INTRA, 423 SEQUENTIAL, 224 MEDIUM and 522 LONG RANGE CONSTRAINTS)
AND 197 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS.
XwinNMR
NMR Ensemble Information
Conformer Selection Criteria
target function
Conformers Calculated Total Number
100
Conformers Submitted Total Number
20
Representative Model
1 (lowest energy)
Additional NMR Experimental Information
Details
ALL TRIPLE-RESONANCE AND NOESY
SPECTRA WERE ACQUIRED USING A CRYOGENIC PROBE.
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
XwinNMR
3.5
Bruker
2
processing
NMRPipe
2004
Delagio,F. et al.
3
data analysis
XEASY
1.3
Eccles, C.; Guntert, P.; Billeter, M.; Wuthrich, K.