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Crystal structure of apo form of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2I48 PDB ID 2I48
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 batch/microseeding 8 298 Ammonium sulfate, HEPPS pH 8.0, EGTA, batch/microseeding, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.59 52.51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.66 α = 87.57 b = 49.68 β = 81.2 c = 57.57 γ = 75.2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD Bruker Platinum 135 Helios 2006-05-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 25.6 99.5 0.036 29.8 7.2 103049 103049
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.35 1.45 98.1 0.219 6 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ID 2I48 1.35 25.6 103049 103049 10367 99.2 0.178 0.178 0.178 0.1779 0.193 0.1928 random 10.327
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.456 0.387 1.055 0.961 -0.365 0.496
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 2.032 c_scbond_it 1.544 c_angle_deg 1.346 c_mcangle_it 1.142 c_mcbond_it 0.821 c_bond_d 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3115 Nucleic Acid Atoms Solvent Atoms 409 Heterogen Atoms
Software Software Software Name Purpose CNS refinement PDB_EXTRACT data extraction PROTEUM PLUS data collection SAINT data reduction PROTEUM PLUS data scaling AMoRE phasing