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Crystal Structure of Nsp 15 from SARS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9 297 5-20% PEG 10000, 0.2M imidazole malate pH 9.0-10.0, VAPOR DIFFUSION, SITTING DROP, temperature 297K
Crystal Properties Matthews coefficient Solvent content 4.99 75.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 166.584 α = 90 b = 166.584 β = 90 c = 166.584 γ = 90
Symmetry Space Group P 43 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MAR CCD 165 mm 2005-11-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.97938 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 52 98.9 0.169 11.8 11.8 24505 24505
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.667 99.9 0.778 4 12
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.6 52.7 24505 23625 1266 100 0.2092 0.20758 0.2136 0.24008 0.2435 RANDOM 28.339
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.372 r_dihedral_angle_4_deg 22.562 r_dihedral_angle_3_deg 18.392 r_dihedral_angle_1_deg 6.135 r_scangle_it 2.066 r_scbond_it 1.33 r_angle_refined_deg 1.301 r_mcangle_it 0.826 r_angle_other_deg 0.772 r_mcbond_it 0.712
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.372 r_dihedral_angle_4_deg 22.562 r_dihedral_angle_3_deg 18.392 r_dihedral_angle_1_deg 6.135 r_scangle_it 2.066 r_scbond_it 1.33 r_angle_refined_deg 1.301 r_mcangle_it 0.826 r_angle_other_deg 0.772 r_mcbond_it 0.712 r_symmetry_hbond_refined 0.229 r_nbd_refined 0.194 r_symmetry_vdw_other 0.184 r_nbd_other 0.182 r_nbtor_refined 0.182 r_xyhbond_nbd_refined 0.173 r_symmetry_vdw_refined 0.114 r_nbtor_other 0.09 r_mcbond_other 0.082 r_chiral_restr 0.077 r_bond_refined_d 0.01 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2714 Nucleic Acid Atoms Solvent Atoms 88 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement ADSC data collection MOSFLM data reduction SHELXS phasing