☰ Navigation Tabs
Solution structure of the second type III domain of human Fibronectin: ensemble of 25 structures
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 2.5mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O 95% H2O/5% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 2 HNHA 2.5mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O 95% H2O/5% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 3 4D_13C-separated_NOESY 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl 100% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 4 HNHB 2.5mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O 95% H2O/5% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 5 15N IPAP-HSQC 1mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 4% Radially compressed polyacrylamide gel, 95% H2O, 5% D2O 95% H2O/5% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 6 C-C long range couplings 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl 100% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 7 Methyl - carbonyl couplings 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl 100% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 8 Methyl - nitrogen couplings 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl 100% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303 9 HACAHB 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl 100% D2O 20mM NaCl, 20mM Na2HPO4 7.0 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Home-built Home built 500 2 Home-built Home built 600
NMR Refinement Method Details Software Simulated annealing in cartesian space Structures derived from 2827 restraints Omega
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 25 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection Omega Beta 6.0.3b2 GE/Bruker 2 processing NMRPipe 2.3 Rev 2005.319.11.22 Frank Delaglio, NIH/NIDDK,LCP 3 data analysis PIPP 4.3.7 Dan Garrett, NIH/NIDDK/LCP 4 structure solution XPLOR-NIH 2.12 Schwieters, Kuszewski, Tjandra, Clore NIH/NIDDK/LCP 5 refinement XPLOR-NIH 2.12 Schwieters, Kuszewski, Tjandra, Clore NIH/NIDDK/LCP