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SpvB ADP-ribosylated actin: orthorhombic crystal form
Crystallization Crystal Properties Matthews coefficient Solvent content 3.84 67.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.385 α = 90 b = 102.348 β = 90 c = 123.803 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2004-10-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X9A 0.979 NSLS X9A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 99 85152
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 32 80138 4084 92.47 0.173 0.172 0.171 0.1821 0.211 0.2176 RANDOM 33.432
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.37 0.13 0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.824 r_dihedral_angle_4_deg 21.152 r_dihedral_angle_3_deg 16.685 r_dihedral_angle_1_deg 6.297 r_scangle_it 3.642 r_scbond_it 2.593 r_angle_refined_deg 1.835 r_mcangle_it 1.343 r_angle_other_deg 1.217 r_mcbond_it 1.004
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.824 r_dihedral_angle_4_deg 21.152 r_dihedral_angle_3_deg 16.685 r_dihedral_angle_1_deg 6.297 r_scangle_it 3.642 r_scbond_it 2.593 r_angle_refined_deg 1.835 r_mcangle_it 1.343 r_angle_other_deg 1.217 r_mcbond_it 1.004 r_xyhbond_nbd_other 0.29 r_symmetry_vdw_other 0.28 r_mcbond_other 0.273 r_nbd_refined 0.246 r_xyhbond_nbd_refined 0.218 r_nbd_other 0.212 r_symmetry_vdw_refined 0.209 r_symmetry_hbond_refined 0.199 r_nbtor_refined 0.181 r_chiral_restr 0.11 r_nbtor_other 0.093 r_metal_ion_refined 0.049 r_bond_refined_d 0.02 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5708 Nucleic Acid Atoms Solvent Atoms 618 Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction