2GQE

Molecular characterization of the Ran binding zinc finger domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1NOESY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
23D_15N-separated_NOESY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
3HNHA1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
4HNCO1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
5HN(CO)CA1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
6HNCACB1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
7CBCA(CO)NH1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
8HNHB1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
9HN(CO)HB1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
10LRCC1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
11HSQC1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
12HSQC-TROSY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
13HCCH-TOCSY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
14(H)C(CO)NH-TOCSY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
15H(CCO)NH-TOCSY1.3 mM hZnF2 U-15N, 13C, 20mM D-Tris, pH 7.0, 50mM NaCl, 1mM D-BME, 10 micromolr ZnCl2, 90%H2O, 10%D2O90% H2O/10% D2O70mM, 20mM Tris, 50mM NaCl7.0AMBIENT298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsUsing CYANA automated NOESY assignmentsCYANA
NMR Ensemble Information
Conformer Selection Criterialowest target function, least violations, favorable non-bonded energies
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA2.1GUNTERT, P. ET AL.
2structure solutionCYANA2.1GUNTERT, P. ET AL.
3processingFelix
4data analysisSparky3.11.2Goddard, T.D. et al.
5collectionVNMR2.3C