2GIP
Solution structure of a portion of the 5'UTR of HspA mRNA from Bradyrhizobium janponicum having deleted G83
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D-NOESY-13CHSQC | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
2 | 2D-NOESY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
3 | 2D-HSQC | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
4 | TOCSY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
5 | HCcHTOCSY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX AVANCE | 600 |
2 | Bruker | DRX AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
NMR | 20 structures | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations,lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 7 | David Case et al. |
2 | processing | DYANA |