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Mutated MAP kinase P38 (Mus Musculus) in complex with Inhbitor PG-895449
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 288 18% (w/v) PEG 1500
100mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K
Crystal Properties Matthews coefficient Solvent content 2.38 48.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.169 α = 90 b = 74.855 β = 90 c = 77.879 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2003-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.000 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 89.7 0.066 11.6 4.1 15751 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.38 0.576 2.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.35 50 16406 14116 745 90.58 0.23195 0.2272 0.2308 0.32321 RANDOM 44.179
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.34 -2.15 1.8
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.637 r_scangle_it 3.925 r_scbond_it 2.409 r_mcangle_it 1.842 r_angle_refined_deg 1.769 r_mcbond_it 1.013 r_angle_other_deg 0.938 r_symmetry_hbond_refined 0.318 r_symmetry_vdw_other 0.267 r_xyhbond_nbd_refined 0.246
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.637 r_scangle_it 3.925 r_scbond_it 2.409 r_mcangle_it 1.842 r_angle_refined_deg 1.769 r_mcbond_it 1.013 r_angle_other_deg 0.938 r_symmetry_hbond_refined 0.318 r_symmetry_vdw_other 0.267 r_xyhbond_nbd_refined 0.246 r_nbd_refined 0.241 r_nbd_other 0.24 r_symmetry_vdw_refined 0.175 r_chiral_restr 0.106 r_nbtor_other 0.096 r_bond_refined_d 0.021 r_gen_planes_refined 0.008 r_gen_planes_other 0.006 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2703 Nucleic Acid Atoms Solvent Atoms 131 Heterogen Atoms 33
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection