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G51S mutant of L. casei FPGS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.3 277 50 mM acetate and 16-24% PEG4000, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.09 41.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.17 α = 90 b = 45.83 β = 107.66 c = 84.28 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 30 95 0.073 18.9 31920 31920
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.85 1.9 72.9 0.39 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.85 20 28971 1505 96.05 0.206 0.204 0.2014 0.247 0.2425 RANDOM 5% 24.986
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 0.19 0.9 -0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.149 r_dihedral_angle_4_deg 19.567 r_dihedral_angle_3_deg 16.107 r_dihedral_angle_1_deg 5.818 r_scangle_it 3.19 r_scbond_it 1.927 r_mcangle_it 1.583 r_angle_refined_deg 1.284 r_mcbond_it 0.911 r_nbtor_refined 0.303
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.149 r_dihedral_angle_4_deg 19.567 r_dihedral_angle_3_deg 16.107 r_dihedral_angle_1_deg 5.818 r_scangle_it 3.19 r_scbond_it 1.927 r_mcangle_it 1.583 r_angle_refined_deg 1.284 r_mcbond_it 0.911 r_nbtor_refined 0.303 r_nbd_refined 0.202 r_xyhbond_nbd_refined 0.189 r_symmetry_hbond_refined 0.165 r_symmetry_vdw_refined 0.161 r_chiral_restr 0.086 r_bond_refined_d 0.006 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3109 Nucleic Acid Atoms Solvent Atoms 255 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing