☰ Navigation Tabs
Structural Characterization of autoinhibited c-Met kinase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 277 1 M diammonium hydrogen phosphate, 0.2 M Sodium chloride, 0.1 M citrate(pH 5.0), and 7.5% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.73 55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 103.803 α = 90 b = 103.803 β = 90 c = 103.803 γ = 90
Symmetry Space Group P 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 103 CCD MARRESEARCH 2004-03-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 32-ID 1.0037 APS 32-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 20 99.2 0.125 5.3 5.4 19824 19665 1 1 30.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.15 2.21 100 0.559 0.7 5.1 1643
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.15 20 19824 19665 842 99.2 0.234 0.23419 0.2229 0.2186 0.2594 RANDOM 35.725
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.406 r_angle_refined_deg 1.097 r_scangle_it 1.094 r_scbond_it 0.655 r_mcangle_it 0.443 r_mcbond_it 0.228 r_symmetry_vdw_refined 0.192 r_nbd_refined 0.183 r_xyhbond_nbd_refined 0.098 r_symmetry_hbond_refined 0.087
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.406 r_angle_refined_deg 1.097 r_scangle_it 1.094 r_scbond_it 0.655 r_mcangle_it 0.443 r_mcbond_it 0.228 r_symmetry_vdw_refined 0.192 r_nbd_refined 0.183 r_xyhbond_nbd_refined 0.098 r_symmetry_hbond_refined 0.087 r_chiral_restr 0.073 r_bond_refined_d 0.007 r_gen_planes_refined 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2396 Nucleic Acid Atoms Solvent Atoms 150 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing