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Phosphoglucomutase from Salmonella typhimurium.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 294 0.2 M magnesium chloride, o.1 M Bis-Tris, 25% PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.34 47.49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.658 α = 90 b = 104.864 β = 90 c = 125.955 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-2 2004-02-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97929 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 35.33 80.4 0.101 21.7 8.5 60537 60537
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 27.2 0.374 2.98 4.2 1441
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD 2 35.33 60272 60272 3609 80.01 0.151 0.151 0.149 0.2001 0.1817 RANDOM 27.691
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.47 0.69 -0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.416 r_dihedral_angle_4_deg 20.362 r_dihedral_angle_3_deg 14.085 r_dihedral_angle_1_deg 6.001 r_scangle_it 3.297 r_scbond_it 2.297 r_angle_refined_deg 1.433 r_mcangle_it 1.287 r_mcbond_it 0.843 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.416 r_dihedral_angle_4_deg 20.362 r_dihedral_angle_3_deg 14.085 r_dihedral_angle_1_deg 6.001 r_scangle_it 3.297 r_scbond_it 2.297 r_angle_refined_deg 1.433 r_mcangle_it 1.287 r_mcbond_it 0.843 r_nbtor_refined 0.306 r_symmetry_vdw_refined 0.228 r_nbd_refined 0.205 r_xyhbond_nbd_refined 0.148 r_symmetry_hbond_refined 0.138 r_chiral_restr 0.092 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8166 Nucleic Acid Atoms Solvent Atoms 879 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection SCALEPACK data scaling autoSHARP phasing