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mitogen activated protein kinase p38alpha (D176A) activating mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.2 277 18% PEG 3350, 0.2M KF, 0.1 HEPES, 25mM bOG, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.07 40.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.86 α = 90 b = 69.415 β = 90 c = 74.064 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2005-09-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-3 0.931 ESRF ID14-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.83 50 99.1 0.088 22 5 31992 31704 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.83 1.86 95.3 0.391 1.9 3.5 1489
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLREP THROUGHOUT 1.83 50 1 29662 29662 1588 99.15 0.178 0.17719 0.17464 0.22391 RANDOM 19.484
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.12 -0.83 -1.29
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.93 r_scangle_it 4.431 r_scbond_it 2.768 r_mcangle_it 1.879 r_angle_refined_deg 1.602 r_mcbond_it 1.034 r_angle_other_deg 0.855 r_symmetry_vdw_other 0.268 r_nbd_other 0.245 r_nbd_refined 0.219
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.93 r_scangle_it 4.431 r_scbond_it 2.768 r_mcangle_it 1.879 r_angle_refined_deg 1.602 r_mcbond_it 1.034 r_angle_other_deg 0.855 r_symmetry_vdw_other 0.268 r_nbd_other 0.245 r_nbd_refined 0.219 r_symmetry_hbond_refined 0.201 r_xyhbond_nbd_refined 0.194 r_chiral_restr 0.113 r_symmetry_vdw_refined 0.113 r_nbtor_other 0.09 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2629 Nucleic Acid Atoms Solvent Atoms 460 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling MOLREP phasing