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Structure of Rv1264N, the regulatory domain of the mycobacterial adenylyl cylcase Rv1264, at pH 6.0
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 291 PEG 200, MES, PEG 3000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.3 45.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.6 α = 90 b = 93.528 β = 90 c = 54.335 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-03-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 0.934 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 47 91.7 0.072 5.1 2.8 58977 54058 24
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.69 92.2 0.353 2 2.1 7802
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.6 12 58799 51196 2706 91.67 0.18902 0.18902 0.18759 0.2004 0.21639 0.2298 RANDOM 29.326
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.36 -0.83 0.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.812 r_dihedral_angle_4_deg 16.887 r_dihedral_angle_3_deg 13.478 r_dihedral_angle_1_deg 4.843 r_scangle_it 3.94 r_scbond_it 2.599 r_mcangle_it 1.489 r_angle_refined_deg 1.414 r_angle_other_deg 1.36 r_mcbond_it 1.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.812 r_dihedral_angle_4_deg 16.887 r_dihedral_angle_3_deg 13.478 r_dihedral_angle_1_deg 4.843 r_scangle_it 3.94 r_scbond_it 2.599 r_mcangle_it 1.489 r_angle_refined_deg 1.414 r_angle_other_deg 1.36 r_mcbond_it 1.311 r_symmetry_vdw_other 0.331 r_mcbond_other 0.26 r_symmetry_vdw_refined 0.247 r_nbd_refined 0.226 r_nbd_other 0.187 r_nbtor_refined 0.172 r_xyhbond_nbd_refined 0.169 r_symmetry_hbond_refined 0.132 r_nbtor_other 0.086 r_chiral_restr 0.078 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2786 Nucleic Acid Atoms Solvent Atoms 353 Heterogen Atoms 63
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SnB phasing