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Solution structure of the GUCT domain from human ATP-dependent RNA helicase DDX50, DEAD box protein 50
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 0.9mM protein U-15N,13C; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O 90% H2O/10% D2O 120mM 7.0 ambient 296 2 3D_15N-separated_NOESY 0.9mM protein U-15N,13C; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O 90% H2O/10% D2O 120mM 7.0 ambient 296
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, restrained molecular dynamics HNN and CACO RDC data, obtained from the Pf1 phage system, were used in the torsion angle dynamics calculation. XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.5 Bruker 2 processing NMRPipe 20030801 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B.A. 4 data analysis KUJIRA 0.9816 Kobayashi, N. 5 structure solution CYANA 2.1 Guntert, P. 6 refinement OPALp Koradi, R.