☰ Navigation Tabs
Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-2 crystal)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 293 sodium acetate, sodium cacodylate, PEG8000, glycerol, Tris, sodium chloride, dithiothreitol, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.99 36.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.812 α = 90 b = 55.812 β = 90 c = 214.41 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV++ 2005-04-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 70.71 16507 880 96.1 0.2207 0.21794 0.2239 0.27474 0.2784 RANDOM 23.913
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.21 0.6 1.21 -1.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.122 r_scangle_it 2.317 r_scbond_it 1.388 r_angle_refined_deg 1.287 r_mcangle_it 0.931 r_angle_other_deg 0.83 r_mcbond_it 0.493 r_nbd_other 0.218 r_symmetry_hbond_refined 0.201 r_nbd_refined 0.197
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.122 r_scangle_it 2.317 r_scbond_it 1.388 r_angle_refined_deg 1.287 r_mcangle_it 0.931 r_angle_other_deg 0.83 r_mcbond_it 0.493 r_nbd_other 0.218 r_symmetry_hbond_refined 0.201 r_nbd_refined 0.197 r_xyhbond_nbd_refined 0.196 r_symmetry_vdw_refined 0.186 r_symmetry_vdw_other 0.126 r_nbtor_other 0.084 r_chiral_restr 0.07 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3074 Nucleic Acid Atoms Solvent Atoms 73 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling MOLREP phasing